Back

Biomedicine & Pharmacotherapy

Elsevier BV

Preprints posted in the last 7 days, ranked by how well they match Biomedicine & Pharmacotherapy's content profile, based on 43 papers previously published here. The average preprint has a 0.03% match score for this journal, so anything above that is already an above-average fit.

1
Molecular signature of pediatric B-ALL determines outcomes post CD19 CAR-T cell therapy

Oszer, A.; Pastorczak, A.; Urbanska, Z.; Miarka, K.; Marschollek, P.; Richert-Przygonska, M.; Mielcarek-Siedziuk, M.; Baggott, C.; Schultz, L.; Moon, J.; Aftandilian, C.; Styczynski, J.; Kalwak, K.; Mlynarski, W.; Davis, K. L.

2026-04-13 oncology 10.64898/2026.04.11.26350681 medRxiv
Top 2%
0.3%
Show abstract

Chimeric antigen receptor T-cell (CAR-T) therapy targeting CD19 has transformed outcomes for children with relapsed or refractory (R/R) B-cell acute lymphoblastic leukemia (B-ALL), yet the influence of molecular subtype on outcomes remains unclear. We evaluated the impact of cytogenetic and molecular signatures on complete response (CR), overall survival (OS), and leukemia-free survival (LFS) after CD19 CAR-T therapy in eighty-six pediatric patients with R/R B-ALL treated with tisagenlecleucel. CR was assessed 30 days after infusion. Cytogenetic data were available for 84 patients and molecular profiling for 62. Survival analyses included 72 patients who received CD19 CAR-T as the sole cellular therapy. Seventy-seven patients achieved CR (89.5%). Pre-infusion bone marrow blasts of [&ge;]20% were associated with lower CR rates (53.8% vs 95.9%, p<0.0001) and significantly reduced OS and LFS (both p<0.0001). Among molecular markers, RAS mutations correlated with inferior OS (p=0.0222) and LFS (0.0402). In multivariate analysis, bone marrow blasts >20% and RAS mutations independently predicted inferior OS. Post CAR-T, CD19 negative relapses showed almost twice higher prevalence of RAS mutations (66% vs 37.5%). These findings highlight RAS mutations as a key molecular predictor of outcome after CD19 CAR-T therapy and suggest emergence of unique risk stratification for patients receiving CD19-targeting therapy.

2
The impact of non-invasive prehabilitation before surgery on emotional well-being in neuro-oncology patients: Insights from the Prehabilita project

Brault-Boixader, N.; Roca-Ventura, A.; Delgado-Gallen, S.; Buloz-Osorio, E.; Perellon-Alfonso, R.; Hung Au, C.; Bartres-Faz, D.; Pascual-Leone, A.; Tormos Munoz, J. M.; Abellaneda-Perez, K.; Prehabilita Working Group,

2026-04-12 oncology 10.64898/2026.04.08.26350382 medRxiv
Top 3%
0.3%
Show abstract

Prehabilitation (PRH) is a preoperative process aimed at optimizing patients functional capacity to improve surgical outcomes and overall well-being. While its physical and cognitive benefits are increasingly documented, its emotional impact, particularly in neuro-oncology patients, remains less explored. This study assessed the psychological effects of a PRH program on 29 brain tumor patients. The primary outcome, emotional well-being, was measured using quality of life and emotional distress metrices. Secondary outcomes included perceived stress levels and control attitudes. Additionally, qualitative data from structured interviews provided further insights into the psychological effects of the intervention. The results indicated significant improvements in quality of life and reductions in emotional distress, particularly among women. While perceived stress levels remained stable, control attitudes showed an increase. Qualitative analysis further highlighted the positive changes in the control sense and identified additional factors, such as the importance of social support sources during the PRH process. Overall, these findings suggest that PRH interventions play a significant role in enhancing emotional well-being among neuro-oncological patients in the preoperative phase. These results underscore the importance of implementing comprehensive and personalized PRH approaches to optimize clinical status both before and after surgery, thereby promoting sustained psychological benefits in this population. This study is based on data collected at Institut Guttmann in Barcelona in the context of the Prehabilita project (ClinicalTrials.gov identifier: NCT05844605; registration date: 06/05/2023).

3
Clinical mechanism of ribavirin action in Hepatitis C treatment: insights from the STOPHCV-1 randomised trial

Moradi Marjaneh, M.; Badhan, A.; Chai, H.; Hadfield, O.; Chen, Y.; Wang, Z.; Thomson, E. C.; Taylor, G. P.; Walker, A. S.; Ansari, M. A.; Barnes, E.; Cooke, G. S.

2026-04-15 infectious diseases 10.64898/2026.04.14.26350846 medRxiv
Top 4%
0.2%
Show abstract

Background: Ribavirin is a guanosine analogue with clinical antiviral activity against a range of RNA viruses including hepatitis C virus (HCV), respiratory syncytial virus and Lassa virus. Several potential mechanisms of action have been proposed, but there is limited data supporting them clinically. Methods: We studied 196 HCV-infected participants from a trial of short-course directly antiviral therapy (STOPHCV-1) which included a factorial randomisation to ribavirin versus no ribavirin. Deep sequencing of the HCV genome was performed on samples with detectable viremia from three time-points: baseline (n = 191), day 3 of treatment (n = 25) and post-treatment failure (n = 47). Results: Ribavirin exposure significantly increased total mutational load at treatment failure (P = 0.0065) and enriched classical ribavirin-associated transitions, including G->A (P = 0.026) and C[-&gt;]U (P = 0.004), along with other key changes including A->G (P = 0.005), U->C (P = 0.023), C->G (P = 0.010), and U->A (P = 0.026). The resulting mutational signature was broad, not dominated by G-related changes. Region-specific analyses demonstrated this increase was broadly distributed across the viral genome, without strong evidence for protection of specific regions. Non-synonymous to synonymous mutation ratios (dN/dS) rose at day 3 (P = 5.5e-5) before declining at failure (P = 8.5e-7), with trends toward higher dN/dS in the ribavirin group at day 3 (P = 0.06). Conclusions: Ribavirin acts as a potent in vivo mutagen, driving viral populations toward genome-wide diversity rather than selecting a few highly fit drug-resistant clones. These findings support an error-catastrophe model.

4
Uncovering the mechanisms of clinically-relevant altered antibiotic responses of Staphylococcus aureus under wound infection-mimetic conditions

Rieger, C. D.; Molaeitabari, A.; Dahms, T. E. S.; El-Halfawy, O. M.

2026-04-17 microbiology 10.64898/2025.12.22.696073 medRxiv
Top 4%
0.2%
Show abstract

Standard in vitro antimicrobial susceptibility testing (AST) using Mueller-Hinton broth (MHB) does not reflect infection-site conditions, and its results often do not correlate with therapeutic outcomes. Here, we compared the antibiotic susceptibility of methicillin-resistant Staphylococcus aureus (MRSA), a common chronic wound pathogen, in simulated wound fluid (SWF) resembling wound exudate versus MHB, revealing discordant AST results across six of nine tested antibiotic classes. The most significant were 128-fold increased resistance to tetracyclines and 256-fold sensitization to {beta}-lactams in SWF. Tetracycline resistance was mediated by MntC, an extracellular manganese-binding protein, whereas {beta}-lactam sensitization was driven by cell envelope remodelling in SWF. Galleria mellonella wound infection results matched the SWF susceptibility phenotypes, suggesting SWF better predicts in vivo wound infection therapeutic outcomes. These comprehensive phenotypic and mechanistic insights into MRSA antibiotic responses under wound-infection-mimetic conditions with direct in vivo validation identify a potential new antibiotic adjuvant target and may guide improved antibiotic therapy for MRSA wound infections.

5
Distinct Metabolic Signatures Distinguish Lung, Colorectal and Ovarian Cancer

Tsiara, I.; Vouzaxaki, E.; Ekström, J.; Rameika, N.; Yang, F.; Jain, A.; Iglesias Alonso, A.; Sjöblom, T.; Globisch, D.

2026-04-13 oncology 10.64898/2026.04.08.26350309 medRxiv
Top 4%
0.1%
Show abstract

Cancer-related casualties are the most common cause of death worldwide. The discovery of biomarkers is of utmost importance for diagnosis and disease monitoring. Herein, we performed a comprehensive metabolomics biomarker discovery effort in plasma from 615 lung, ovarian and colorectal cancer patients at diagnosis and 95 non-cancerous control subjects. This pan-cancer investigation identified specific panels of metabolites in the entire sample cohort with a high discriminating power and demonstrated by combined ROC AUC values of up to 0.95. The identified metabolites are mainly associated with lipid and amino acid metabolism as well as xenobiotic transformation. These metabolite panels of high predictive power provide new metabolic insights in these cancers and demonstrate the potential of metabolomics for improved diagnosis and monitoring disease progression.

6
NMF Deconvolution of a High-ROS Transcriptional Program Uncovers mTOR-Dependent Therapeutic Sensitivity in Stomach Adenocarcinoma

Roy, R.; Patnaik, J.; Chakraborty, A.; Patnaik, S.; Parija, T.

2026-04-16 oncology 10.64898/2026.04.12.26350699 medRxiv
Top 4%
0.1%
Show abstract

Background: Stomach adenocarcinoma is driven by heterogeneity, limiting therapeutic success. Although ROS acts as a continuous redox rheostat for tumor evolution, it is categorized based on binary models that are masked by tumor-microenvironment (TME) confounders. Here, we have defined a continuous, TME-independent ROS axis to help identify intrinsic vulnerabilities and improve patient stratification. Methods: Non-negative matrix factorization (NMF) defined a ROS-Axis in TCGA-STAD which was validated in ACRG Cohort. Multivariate regression model isolated intrinsic signatures via residual ROS scores by adjusting for TME confounders. Survival was assessed using Cox hazard models. Drug sensitivities were mapped using GDSC2/ElasticNet modeling with cross-cohort replication. Results: Our results define a reproducible ROS gradient, driven by effectors like NQO1 and SOD1, characterizing ROS-high tumors as proliferative, epithelial and immune -cold. High residual ROS score was associated with an improved prognosis, regardless of TNM stage and age. Pharmacogenomic mapping revealed an overlapping sensitivity to mTOR inhibitors in ROS-high gastric cancer tumors which persisted after TME confounder adjustment. Conclusion: The continuous ROS axis provides a functional readout of metabolic dependency that refines traditional anatomical staging. By identifying mTOR dependent cold tumors, our framework offers a precision strategy for immunotherapy-resistant patients like those affected by microsatellite-stable gastric cancer.

7
GLP-1 Receptor Agonists as a Potential Fifth Pillar of GDMT in HFrEF (NYHA II-IV): A Multicenter Real-World Propensity-Matched Analysis

Yousafzai, O.; Kanwal, K.; Annie, F. H.; Rinehart, S.

2026-04-16 cardiovascular medicine 10.64898/2026.04.13.26350824 medRxiv
Top 5%
0.1%
Show abstract

Abstract Background: Despite widespread adoption of contemporary guideline-directed medical therapy (GDMT), patients with heart failure with reduced ejection fraction (HFrEF) continue to experience substantial residual morbidity and mortality. Glucagon-like peptide-1 receptor agonists (GLP-1RAs) have demonstrated cardiometabolic benefits in diabetes and obesity, but their role in HFrEF remains uncertain. Objectives: To evaluate whether the addition of GLP-1RAs to optimized GDMT is associated with improved clinical outcomes in patients with HFrEF (NYHA class II-IV). Methods: We conducted a retrospective, multicenter cohort study using the TriNetX Research Network. Adults ([&ge;]18 years) with HFrEF (LVEF [&le;]40%) receiving GDMT between January 2020 and October 2024 were included. Patients treated with GLP-1RAs were compared with those on GDMT alone. After 1:1 propensity score matching, 1,518 patients were included in each cohort. Outcomes over 2 years included all-cause mortality, major adverse cardiovascular events (MACE), critical care utilization, and acute kidney failure. Time-to-event analyses were performed using Kaplan-Meier methods and Cox proportional hazards models. Results: In the matched cohort (mean age [~]63 years, [~]33% female), GLP-1RA use was associated with significantly lower all-cause mortality compared with GDMT alone (12.8% vs 23.8%; hazard ratio [HR] 0.48; 95% CI 0.40-0.57; p<0.001), corresponding to an absolute risk reduction of 11.0%. MACE was also reduced (35.8% vs 47.4%; HR 0.64; 95% CI 0.58-0.72; p<0.001). Additionally, GLP-1RA therapy was associated with lower critical care utilization (18.4% vs 28.9%; HR 0.55; 95% CI 0.47-0.64; p<0.001) and reduced acute kidney failure (29.2% vs 37.3%; HR 0.67; 95% CI 0.59-0.76; p<0.001). Rates of pancreatitis and substance-related disorders were low and not significantly different between groups. Conclusions: Among patients with HFrEF receiving contemporary GDMT, adjunctive GLP-1RA therapy was associated with significant reductions in mortality, cardiovascular events, and healthcare utilization. These findings support the potential role of GLP-1RAs as a novel, mechanism-complementary therapy in HFrEF. Prospective randomized trials are needed to confirm these observations and determine whether GLP-1RAs should be incorporated as a fifth pillar of GDMT.

8
Primary care metronidazole prescription in public and private facilities of South Benin: A register-based cross-sectional study

TANKPINOU ZOUMENOU, H.; Faucher, J.-F.

2026-04-14 infectious diseases 10.64898/2026.04.07.26350314 medRxiv
Top 5%
0.1%
Show abstract

Background: Metronidazole (MTZ) is a first-line antibiotic for several enteric infections. Its use is common in low-income countries, where most primary-care consultations are conducted by nurses. However, increasing resistance among some enteric pathogens is a growing concern. Using WHO guidelines, we conducted a register-based cross-sectional study to assess MTZ prescribing practices and their determinants in public and private primary healthcare facilities in South Benin. Methods: We performed a register-based cross-sectional study covering the year 2020 in 11 primary healthcare facilities (5 public and 6 private) in Abomey-Calavi, South Benin, following WHO recommendations. In total, 200 visits per facility were selected using systematic random sampling. The primary outcome was the prevalence of MTZ prescription. Determinants of MTZ prescription were identified using multivariable logistic regression analysis. Results: In total, 2,200 medical visits were analyzed. The median age of patients was 19 years, and 57% were female. Antimalarials were prescribed in 52% of visits. Antibacterial agents were prescribed in the majority of visits, with MTZ being the second most frequently prescribed antibiotic (18%), after aminopenicillins (27%). In multivariable analysis, digestive symptoms (adjusted odds ratio [aOR], 8.65; 95% confidence interval [CI], 6.49-11.6), genitourinary symptoms (aOR, 6.84; 95% CI, 3.18-15.0), and skin lesions (aOR, 2.39; 95% CI, 1.58-3.60) were independently associated with increased odds of MTZ prescription. In contrast, fever (aOR, 0.66; 95% CI, 0.49-0.87), respiratory symptoms (aOR, 0.44; 95% CI, 0.26-0.71), and malaria (aOR, 0.21; 95% CI, 0.15-0.28) were associated with decreased odds. Visits in the private sector were also associated with higher odds of MTZ prescription compared with the public sector (aOR, 2.31; 95% CI, 1.78-3.02). Conclusion: MTZ is the second most commonly prescribed antibiotic in primary care in the study area, with its use largely driven by digestive symptoms. Further studies are needed to assess the appropriateness of this prescription. Additionally, research is warranted to understand better the determinants of higher antimicrobial prescribing in the private healthcare sector.

9
SCOPE: Integrating Organoid Screening and Clinical Variables Through Machine Learning for Cancer Trial Outcome Prediction

Bouteiller, J.; Gryspeert, A.-R.; Caron, J.; Polit, L.; Altay, G.; Cabantous, M.; Pietrzak, R.; Graziosi, F.; Longarini, M.; Schutte, K.; Cartry, J.; Mathieu, J. R.; Bedja, S.; Boileve, A.; Ducreux, M.; Pages, D.-L.; Jaulin, F.; Ronteix, G.

2026-04-11 oncology 10.64898/2026.04.10.26350512 medRxiv
Top 6%
0.1%
Show abstract

Background: Predicting whether a treatment will demonstrate meaningful clinical benefit before committing to a large-scale trial remains a major unmet need in oncology. Patient-derived organoids (PDOs) recapitulate individual tumor drug sensitivity, but have not been used to forecast population-level trial outcomes. We developed SCOPE (Screening-to-Clinical Outcome Prediction Engine), a platform that integrates PDO drug screening with clinical prognostic modeling to predict arm-level median progression-free survival (mPFS) and objective response rate (ORR) without access to any trial outcome data. Patients and methods: SCOPE was trained on 54 treatment lines from patients with metastatic colorectal cancer (mCRC, n=15) and metastatic pancreatic ductal adenocarcinoma (mPDAC, n=39) with matched clinical data and PDO drug screening across 9 compounds. A Clinical Score module captures baseline prognosis; a Drug Screen Score module quantifies treatment-specific organoid sensitivity. To predict trial outcomes, synthetic patient profiles are generated from published eligibility criteria and matched to a biobank of 81 PDO lines. Predictions were externally validated against 32 arms from 23 published trials, treatment ranking was assessed across 8 head-to-head comparisons, and prospective applicability was tested for daraxonrasib (RMC-6236), a novel pan-RAS inhibitor in mPDAC. Results: Predicted mPFS strongly agreed with published outcomes (R2=0.85, MAE=0.82 months; Pearson r=0.92, P<0.001), approaching the empirical concordance between two independently measured clinical endpoints (ORR vs. mPFS, R2=0.87). ORR prediction was similarly robust (R2=0.71, MAE=7.3 percentage points). Integrating organoid and clinical data significantly outperformed either alone (P=0.001). SCOPE correctly identified the superior arm in 7 of 8 head-to-head comparisons (88%, P<0.05). Applied to daraxonrasib prior to phase 3 data availability, the platform predicted superiority over standard chemotherapy in KRAS-mutant mPDAC, consistent with emerging clinical data. Conclusion: By combining functional organoid drug screening with clinical modeling, SCOPE generates calibrated efficacy predictions for both established regimens and novel agents without prior clinical data. This approach could support clinical trial design, treatment arm selection, and go/no-go decisions, offering a new tool to improve the efficiency of gastrointestinal cancer drug development.

10
Vaccine-induced antibody and T cell responses in children with acute lymphoblastic leukemia

Shapiro, J. R.; Dorogy, A.; Science, M.; Gupta, S.; Alexander, S.; Bolotin, S.; Watts, T. H.

2026-04-12 oncology 10.64898/2026.04.10.26350531 medRxiv
Top 6%
0.1%
Show abstract

Children with acute lymphoblastic leukemia (ALL) are treated with multiagent chemotherapy that causes profound changes to the immune system. There are limited data on how disease and therapy impact antigen-specific immune memory, leading to inconsistent guidelines on best practices for revaccination of this population. Here, to inform vaccine guidance, we investigated whether immunity derived from routine childhood measles and varicella zoster virus (VZV) vaccines is maintained during and after therapy for childhood ALL. We report that antibodies against measles and VZV were significantly reduced in children with ALL (n=45) compared to healthy controls (n=13), particularly in older children in whom a longer time had passed since their most recent vaccine dose. However, the avidity of the measles and VZV-specific antibodies was indistinguishable between groups. Despite changes to the composition of the T cell compartment, both overall and antigen-specific T cell function were preserved in children with ALL. These data provide compelling evidence for revaccination of children following ALL treatment. Intact T cell responses suggest that post-treatment revaccination would be effective.

11
Comparative LUSZ Therapeutic Study (LUSZ_AVIST) of Antiviral, Antiretroviral, and Immunosuppressive Treatments in Hospitalized COVID-19 Patients with High-Risk Factors, Biomarkers, and Disease Progression.

Makdissy, N.; Makdessi, E. W.; Fenianos, F.; Nasreddine, N.; Daher, W.; El Hamoui, S.

2026-04-13 respiratory medicine 10.64898/2026.04.10.26350587 medRxiv
Top 6%
0.0%
Show abstract

COVID-19 has spread rapidly and caused a global pandemic making it one of the deadliest in history. Early identification of patients with coronavirus disease 2019 who may develop critical illness is of immense importance. Therefore, novel biomarkers were needed to identify patients who will suffer rapid disease progression to severe complications and death. Many treatments were adopted including the antiviral Remdesivir, the antiretroviral Lopinavir /Ritonavir and Tocilizumab. Our study aimed not only to specify high-risk factors and biomarkers of fatal outcome in hospitalized subjects with coronavirus but also to compare the efficacy of the three considered treatments to help clinicians better choose a therapeutic strategy and reduce mortality. We divided the population (n=711) into four main groups based according to the WHO ordinal severity scale. The percentage of mortality, in and out the hospital, the length of stay in the hospital, the pulmonary inflammatory lesion and its distribution, the SARS-CoV-2 IgM and IgG variations at admission, the inflammatory markers, the complete blood count, the coagulation factors and enzymes, proteins and electrolytes profile, glucose and lipid profile, and other relevant markers were measured. The significance of the observed variation was assessed by multivariate and ANOVA analyses. We succeeded to establish a novel predictive scoring model of disease progression based on a cohort of Lebanese hospitalized patients relying on the pulmonary inflammatory lesions, inflammation biomarkers such as LDH, D-Dimer, CRP, IL-6 and the lymphocyte count, the number of comorbidities and the age of the patient which all were significantly correlated with the illness severity showing best outcomes with immunomodulatory and anticoagulant treatments by the results. As top tier, Tocilizumab was more efficient than the two other treatments in non-severe cases but none of the used treatments was insanely effective alone to reduce mortality in severe cases.

12
Short-Term Safety of Low-Dose Creatine Hydrochloride: A 28-Day Single-Arm Pilot Study

Wagner, J. C.; Ostojic, S.; Faulkner, W.; Faulkner, M.

2026-04-16 nutrition 10.64898/2026.04.10.26349886 medRxiv
Top 7%
0.0%
Show abstract

Background: Creatine monohydrate (typically 5 to 20 g/day) has a well-established safety profile across diverse populations. Creatine hydrochloride (CR-HCl) is a highly soluble creatine formulation that may allow effective supplementation at substantially lower doses (750 mg to 3 g/day); however, controlled human safety data specific to CRHCl remain limited. Objective: To evaluate the short-term laboratory safety and tolerability of low dose CRHCl supplementation administered for 28 days in healthy adults. Methods: This single center, single arm, singl blind pilot safety study enrolled 11 healthy adults (10 females, 1 male; mean age 44.6 plus/minus 7.2 years). Participants consumed 750 mg/day CRHCl for 28 consecutive days while maintaining their usual diet and physical activity patterns. Fasting blood and urine samples were collected at baseline and Day 28. Laboratory assessments included hematological, lipid, and clinical chemistry biomarkers. Pre and post changes were evaluated using paired parametric and nonparametric tests, baseline-adjusted regression models, bootstrap confidence intervals, and false discovery rate (FDR) correction. Results: All participants completed the intervention. No clinically meaningful changes were observed in lipid parameters, hematologic indices, renal markers, or most chemistry analytes after adjustment for multiple comparisons. Fasting glucose increased modestly (8.1 mg/dL) prior to multiplicity adjustment but was not statistically significant after FDR correction and remained within reference ranges. Serum bicarbonate decreased slightly (2.4 mmol/L); although statistically detectable in parametric analysis, values remained within physiological limits and were not consistently supported by nonparametric testing.

13
A conserved grain-associated immunosuppressive niche in Sudanese patients with mycetoma.

Osman, M.; Ashwin, H.; Calder, G.; O'Toole, P.; Bakhiet, S. M.; Musa, A. M.; Kaye, P. M.; Fahal, A. H.

2026-04-13 infectious diseases 10.64898/2026.04.09.26350374 medRxiv
Top 7%
0.0%
Show abstract

Mycetoma is a neglected tropical disease caused by various bacterial and fungal pathogens that has a significant health impact across a broad geographically defined "mycetoma belt" spanning South America, Africa and Asia. Histologically, mycetoma is characterised by invasive and destructive granuloma development in the skin, deep tissues and bone, leading to tissue destruction, deformities and high morbidity. The presence of macroscopic, highly compacted pathogen microcolonies, or "grains," is a key diagnostic feature, and the formation of grains supports pathogen persistence and disease chronicity. However, there is a paucity of information on immune responses in mycetoma patients and on the relative importance of phylogeny and/or grains in establishing the local immune landscape. Here, we used spatial proteomics to examine the distribution of 43 immune-related proteins in surgical biopsies from 11 patients with mycetoma of bacterial (Actinomycetoma; Actinomadura pelletierii and Streptomyces somaliensis; n=6) and fungal (Eumycetoma; Madurella mycetomatis; n=5) origin. Using mixed-effects modelling, an exploratory analysis across species and pathogen classes revealed few significant differences in immune marker expression. In contrast, and independently of pathogen class, the cellular infiltrate closest to grain boundaries had higher per-cell expression of CD66b+, ARG1, and VISTA. The preferential accumulation of CD66b+ARG1+VISTA+ cells at grain boundaries was confirmed by quantitative immunofluorescence analysis. Hence, the local tissue microenvironment surrounding the mycetoma grain represents a specialised immunosuppressive niche, with parallels to the tumour microenvironment.

14
Validation of Immunoscore for Prognostic Stratification in HPV-associated Oropharyngeal Cancer: An International Multicenter Study

Nguyen, D. H.; Majdi, A.; Marliot, F.; Houtart, V.; Kirilovsky, A.; Hijazi, A.; Fredriksen, T.; de Sousa Carvalho, N.; Bach, A.- S.; Gaultier, A.- L.; Fabiano, E.; Kreps, S.; Tartour, E.; Pere, H.; Veyer, D.; Blanchard, P.; Angell, H. K.; Pages, F.; Mirghani, H.; Galon, J.

2026-04-11 oncology 10.64898/2026.04.08.26350238 medRxiv
Top 8%
0.0%
Show abstract

BackgroundTreatment optimization in HPV-associated oropharyngeal cancer (OPSCC) remains challenging, as recent de-escalation trials have shown limited success. Current patient selection strategies based on smoking history and TNM classification are insufficient, highlighting the need for robust, standardized prognostic biomarkers. We report the first validation of the Immunoscore (IS) for prognostic stratification in HPV-associated OPSCC. Patients and methodsWe analyzed 191 HPV-associated (p16+ and HPV DNA/RNA+) OPSCC patients from an international multicenter cohort (2015-2024), comprising a French monocentric retrospective training cohort (N = 48) and three validation cohorts: French monocentric retrospective (N = 48), French multicenter prospective (N = 50), and US multicenter retrospective (N = 45). IS is a standardized digital pathology assay quantifying CD3lJ and CD8lJ densities in tumor cores and invasive margins, with cut-offs defined in the training cohort and validated across cohorts. Associations with disease-free survival (DFS), time to recurrence (TTR) and overall survival (OS) were assessed, alongside 3RNA-seq and sequential immunofluorescence profiling of immune composition. ResultsMedian age 65; 80% male; 74% smokers; 66% T1-2; 82% N0-1 (AJCC8th). IS-High patients demonstrated superior 3-year DFS in the training and validation cohorts 1-3 (all log-rank P < 0.05). Multivariable analysis identified IS-Low as the strongest independent risk factor for DFS (HR 9.03; 95% CI: 4.02-20.31; P < 0.001). The model combining IS with clinical factors showed higher predictive accuracy for DFS (C-index 0.82) than clinical variables alone (0.7; P < 0.0001). Similar findings were observed for TTR and OS. IS-High tumors showed markedly higher enrichment of lymphoid and myeloid immune cell populations, contrasting with immune-poor signatures in IS-Low tumors. ConclusionsIS is a robust biomarker that outperforms standard clinical variables in both prognostic and predictive accuracy. The enriched cytotoxic immune infiltrate in IS-High tumors explains favorable outcomes and supports their suitability for treatment de-escalation. Prospective validation is warranted.

15
Effectiveness of 2025-2026 mRNA-1283 and BNT162b2 COVID-19 Vaccines Against COVID-19 Related Hospitalizations and Medically-Attended COVID-19 Among Adults Aged >= 65 years in the United States

Vicic, N.; Bogdanov, A.; Hensler, H.; Ryan, T.; Zeng, N.; Beck, E.; Patry, E.; Bonafede, M.; Araujo, A. B.; Wilson, A.

2026-04-16 infectious diseases 10.64898/2026.04.13.26350772 medRxiv
Top 8%
0.0%
Show abstract

Background: The 2025/2026 COVID-19 vaccine season introduced updated formulations targeting the LP.8.1 lineage. This study assessed the absolute vaccine effectiveness (aVE) of mRNA-1283 and BNT162b2 on COVID-19 outcomes in adults aged [&ge;]65 years. Methods: Background: The 2025/2026 COVID-19 vaccine season introduced updated formulations targeting the LP.8.1 lineage. This study assessed the absolute vaccine effectiveness (aVE) of mRNA-1283 and BNT162b2 on COVID-19 outcomes in adults aged [&ge;]65 years. Methods: This retrospective study used linked electronic health record and administrative claims data through Jan 31, 2026. Adults [&ge;]65 years who received the mRNA-1283 or BNT162b2 2025/2026 COVID-19 vaccine were matched to unvaccinated individuals. Inverse probability of treatment weighting was applied to matched cohorts of each vaccine to balance covariates. Each vaccine was evaluated independently against its own unvaccinated comparator group. aVE against COVID-19 related hospitalization and medically-attended COVID-19 was estimated using Cox proportional hazards models; aVE = 100 x (1 - hazard ratio [HR]). Results: We identified 233,072 mRNA-1283 recipients and 422,610 BNT162b2 recipients [&ge;]65 years. The aVE (95% confidence interval) of mRNA-1283 against COVID-19 related hospitalization and medically-attended COVID-19 was 59.3% (39.0%, 72.9%) and 42.0% (35.0%, 48.3%) among adults [&ge;]65 years and 66.9% (45.9%, 79.8%) and 50.2% (42.1%, 57.2%) in [&ge;]75 years, respectively. The aVE of BNT162b2 against COVID-19 related hospitalization and medically-attended COVID-19 was 48.3% (32.4%, 60.5%) and 41.2% (36.2%, 45.8%) in [&ge;]65 years and 45.9% (26.0%, 60.4%) and 44.0% (37.8%, 49.6%) in [&ge;]75 years, respectively. Conclusions: This is the first real-world evidence showing that mRNA-1283 prevents COVID-19-related hospitalizations and medically attended events in vulnerable older adults at highest risk of severe disease. These findings support mRNA-1283 as an important public health tool for reducing the ongoing burden of COVID-19.Results: We identified 233,072 mRNA-1283 recipients and 422,610 BNT162b2 recipients [&ge;]65 years. The aVE (95% confidence interval) of mRNA-1283 against COVID-19 related hospitalization and medically-attended COVID-19 was 59.3% (39.0%, 72.9%) and 42.0% (35.0%, 48.3%) among adults [&ge;]65 years and 66.9% (45.9 %, 79.8%) and 50.2% (42.1%, 57.2%) in [&ge;]75 years, respectively. The aVE of BNT162b2 against COVID-19 related hospitalization and medically-attended COVID-19 was 48.3% (32.4%, 60.5%) and 41.2% (36.2%, 45.8%) in [&ge;]65 years and 45.9% (26.0%, 60.4%) and 44.0% (37.8%, 49.6%) in [&ge;]75 years, respectively. Conclusions: This is the first real-world evidence showing that mRNA-1283 prevents COVID-19-related hospitalizations and medically attended events in vulnerable older adults at highest risk of severe disease. These findings support mRNA-1283 as an important public health tool for reducing the ongoing burden of COVID-19.

16
Drug response profiling guides precision therapy in relapsed and refractory childhood acute lymphoblastic leukemia

Steffen, F. D.; Lissat, A.; Alten, J.; Kriston, A.; Scheidegger, N.; Eckert, C.; Bodmer, N.; Schori, L.; Schühle, S.; Arpagaus, A.; Gutnik, S.; Manioti, D.; Bruderer, N.; Zeckanovic, A.; Västrik, I.; Nyiri, G.; Kovacs, F.; Thorhauge Als-Nielsen, B. E.; Attarbaschi, A.; Rademacher, A.; Elitzur, S.; Jacoby, E.; De Moerloose, B.; Svenberg, P.; Ancliff, P.; Sramkova, L.; Buldini, B.; Balduzzi, A.; Boer, J. M.; Mielcarek, M.; Ceppi, F.; Ansari, M.; Halter, J.; Schmiegelow, K.; Locatelli, F.; DelBufalo, F.; Stanulla, M.; Kulozik, A. E.; Schrappe, M.; Rohrlich, P.; Cave, H.; Baruchel, A.; von Stack

2026-04-11 oncology 10.64898/2026.04.08.26350164 medRxiv
Top 8%
0.0%
Show abstract

Children with relapsed or refractory acute lymphoblastic leukemia (ALL) require more effective and less toxic therapies. We established a prospective, multicenter Drug Response Profiling (DRP) registry (NCT06550102) integrating functional testing into precision-guided treatment. DRP was performed for 340 patients from 17 European countries with a turn-around time of two-weeks. Image-based drug screening with over 135000 unique perturbations revealed a heterogeneous landscape of ex vivo responses to 88 drugs on average. Ranking drug responses across the patient cohort defined individual drug fingerprints, identifying "DRP twins" by similarity in sensitivity and resistance independent of genetic ALL subtypes. Of 239 high-risk patients with follow-up, DRP-informed interventions were reported for 63 patients (26%). Patients received combination therapies based on venetoclax, tyrosine kinase inhibitors, trametinib, bortezomib or selinexor, resulting in objective clinical responses in 43 cases (68%). Precision-guided treatments allowed bridging to cellular therapies in 42 patients among whom 28 (67%) were still alive with a median follow-up of 21 months after DRP (IQR: 14.7-26.6 months). Top responders to venetoclax, ranked within the first tertile of the cohort, had superior 1-year event-survival compared to venetoclax non-responders (0.57 [95% CI, 0.39-0.85] vs. 0.25 [95% CI, 0.11-0.58]). Collectively, these findings demonstrate the feasibility and clinical relevance of functional profiling within an international network. This scalable framework enables individualized therapy selection for enrolment in adaptive precision trials for high-risk pediatric ALL.

17
A Replicable NeuroMark Template for Whole-Brain SPECT Reveals Data-Driven Perfusion Networks and Their Alterations in Schizophrenia

Harikumar, A.; Baker, B.; Amen, D.; Keator, D.; Calhoun, V. D.

2026-04-12 psychiatry and clinical psychology 10.64898/2026.04.08.26349985 medRxiv
Top 8%
0.0%
Show abstract

Single photon emission computed tomography (SPECT) is a highly specialized imaging modality that enables measurement of regional cerebral perfusion and, in particular, resting cerebral blood flow (rCBF). Recent technological advances have improved SPECT quantification and reliability, making it increasingly useful for studying rCBF abnormalities and perfusion network alterations in psychiatric and neurological disorders. To characterize large scale functional organization in SPECT data, data driven decomposition methods such as independent component analysis (ICA) have been used to extract covarying perfusion patterns that map onto interpretable brain networks. Blind ICA provides a data driven approach to estimate these networks without strong prior assumptions. More recently, a hybrid approach that leverages spatial priors to guide a spatially constrained ICA (sc ICA) have been used to fully automate the ICA analysis while also providing participant-specific network estimates. While this has been reliably demonstrated in fMRI with the NeuroMark template, there is currently no comparable SPECT template. A SPECT template would enable automatic estimation of functional SPECT networks with participant-specific expressions that correspond across participants and studies. The current study introduces a new replicable NeuroMark SPECT template for estimating canonical perfusion covariance patterns (networks). We first identify replicable SPECT networks using blind ICA applied to two large sample SPECT datasets. We then demonstrate the use of the resulting template by applying sc-ICA to an independent schizophrenia dataset. In sum, this work presents and shares the first NeuroMark SPECT template and demonstrating its utility in an independent cohort, providing a scalable and robust framework for network-based analyses.

18
Early-life adversity and markers of vulnerability to enduring pain in youth: a multimodal neuroimaging study of the ABCD cohort

Quide, Y.; Lim, T. E.; Gustin, S. M.

2026-04-11 psychiatry and clinical psychology 10.64898/2026.04.07.26350367 medRxiv
Top 8%
0.0%
Show abstract

BackgroundEarly-life adversity (ELA) is a risk factor for enduring pain in youth and is associated with alterations in brain morphology and function. However, it remains unclear whether ELA-related neurobiological changes contribute to the development of enduring pain in early adolescence. MethodsUsing data from the Adolescent Brain Cognitive Development (ABCD) Study, we examined multimodal magnetic resonance imaging (MRI) markers in children assessed at baseline (ages 9-11 years) and at 2-year follow-up (ages 11-13 years). ELA exposure was defined at baseline to maximise temporal separation between early adversity and later enduring pain. Participants with enduring pain at follow-up (n = 322) were compared to matched pain-free controls (n = 644). Structural MRI, diffusion MRI (fractional anisotropy, mean diffusivity), and resting-state functional connectivity data were analysed. Linear models tested main effects of enduring pain, ELA, and their interaction on brain metrics, controlling for relevant covariates. ResultsELA exposure was associated with smaller caudate and nucleus accumbens volumes, and reduced surface area of the left rostral middle frontal gyrus. No significant effects of enduring pain or ELA-by-enduring pain interaction were observed across grey matter, white matter, or functional connectivity measures. ConclusionsELA was associated with alterations in fronto-striatal regions in late childhood, but these changes were not linked to enduring pain in early adolescence. These findings suggest that ELA-related neurobiological alterations may represent early markers of vulnerability rather than concurrent correlates of enduring pain. Longitudinal follow-up is needed to determine whether these alterations contribute to later chronic pain risk.

19
Racial Differences in Negative Symptoms of Schizophrenia: Examining the Role of Defeatist Beliefs and Discrimination

Spann, D. J.; Hall, L. M.; Moussa-Tooks, A.; Sheffield, J. M.

2026-04-11 psychiatry and clinical psychology 10.64898/2026.04.08.26350400 medRxiv
Top 8%
0.0%
Show abstract

BackgroundNegative symptoms are core features of schizophrenia that relate strongly to functional impairment, yet interventions targeting these symptoms remain largely ineffective. Emerging theoretical work highlights how environmental factors may shape and maintain negative symptoms. Although racial disparities in schizophrenia diagnosis among Black Americans are well documented and linked to racial stress and psychosis, the impact of racial stress on negative symptoms has not been examined. This study provides an initial test of a novel theory proposing that racial stress - here measured by racial discrimination - influences negative symptom severity through exacerbation of negative cognitions about the self, particularly defeatist performance beliefs (DPB). Study DesignParticipants diagnosed with schizophrenia-spectrum disorder (SSD) (N = 208; 80 Black, 128 White) completed the Positive and Negative Syndrome Scale (PANSS), the Defeatist Beliefs Scale, and self-report measures of subjective racial and ethnic discrimination (Racial and Ethnic Minority Scale and General Ethnic Discrimination Scale). Relationships among variables were tested using linear regression and mediation analysis. Study ResultsBlack participants exhibited significantly greater total and experiential negative symptoms than White participants with no group difference in DPB. Racial discrimination explained 46% of the relationship between race and negative symptoms. Among Black participants, higher DPB were associated with greater negative symptom severity. Discrimination was positively related to both DPB and negative symptoms. DPB partially mediated the relationship between discrimination and negative symptoms. ConclusionsFindings suggest that racial stress contributes to negative symptom severity via defeatist beliefs among Black individuals, highlighting potential targets for culturally informed interventions.

20
The effect of sedentary behaviour and physical activity on 1719 diseases: a Mendelian randomisation phenome-wide association study (MR-PheWAS)

Xu, J.; Parker, R. M. A.; Bowman, K.; Clayton, G. L.; Lawlor, D. A.

2026-04-14 public and global health 10.64898/2026.04.10.26350507 medRxiv
Top 8%
0.0%
Show abstract

Background Higher levels of sedentary behaviour, such as leisure screen time (LST), and lower levels of physical activity are associated with diseases across multiple body systems which contribute to a large global health burden. Whether these associations are causal is unclear. The primary aim of this study is to investigate the causal effects of higher LST (given greater power) and, secondarily, lower moderate-to-vigorous intensity physical activity (MVPA), on a wide range of diseases in a hypothesis-free approach. Methods A two-sample Mendelian randomisation phenome-wide association study was conducted for the main analyses. Genetic single nucleotide polymorphisms (SNPs) were first selected as exposure genetic instruments for LST (hours of television watched per day; 117 SNPs) and MVPA (higher vs. lower; 18 SNPs) based on the genome-wide significant threshold (p < 5*10-8) from the largest relevant genome-wide association study (GWAS). For disease outcomes, we used summary results from FinnGen GWAS, including 1,719 diseases defined by hospital discharge International Classification of Diseases (ICD) codes in 453,733 European participants. For the main analyses, we used the inverse-variance weighting method with a Bonferroni corrected p-value of p [&le;] 3.47*10-4. Sensitivity analyses included Steiger filtering, MR-Egger and weighted median analyses, and data from UK Biobank were used to explore replication. Findings Genetically predicted higher LST was associated with increased risk of 87 (5.1% of the 1,719) diseases. Most of these diseases were in musculoskeletal and connective tissue (n=37), genitourinary (n=12) and respiratory (n=8) systems. Genetic liability to lower MVPA was associated with six diseases: three in musculoskeletal and connective tissue and genitourinary systems (with greater risk of these diseases also identified with higher LST), and three in respiratory and genitourinary systems. Sensitivity analyses largely supported the main analyses. Results replicated in UK Biobank, where data available. Conclusions Higher levels of sedentary behaviour, and lower levels of physical activity, causally increase the risk of diseases across multiple body systems, making them promising targets for reducing multimorbidity.